🧬♻️ An AI-native, build-in-public compounding loop for aging science: falsifiable question → open data → public verifier → honest write-up → share → compound. No wet lab required.
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Updated
Oct 5, 2026 - Python
🧬♻️ An AI-native, build-in-public compounding loop for aging science: falsifiable question → open data → public verifier → honest write-up → share → compound. No wet lab required.
Open-source computational infrastructure for understanding, measuring and modeling biological aging.
Interactive force graph tracing diseases back to their root causes in the Hallmarks of Aging
Reproducible AlphaFold + AutoDock Vina docking & redocking-validation pipeline (laptop-scale, CPU-only)
Why do dogs age so fast, and can AI help change it? A source-cited, cross-model-verified dossier: AlphaFold, IBM MAMMAL (with a video fact-check), AI for dogs & wolves, ageing biology, interventions, and ranked research paths. CC BY 4.0.
Dog aging and longevity research: cohorts, trials, drug programs, data, tools and papers. Companion dogs as the fastest route to human geroscience.
An agentic research project to collect, document, and track progress in longevity science
Group-aware baselines, leakage checks and reproducible reports for regenerative-medicine feature tables.
Research checklists for published hiPSC maintenance, dual-SMAD, and GiWi protocols, with range checks and sterile gates.
Brightfield colony and organoid morphology QC. Synthetic bake-off, retrainable logistic baseline. A contamination flag is triage, not a diagnosis.
Offline gravimetric flow analysis, independent-repeat uncertainty and drift diagnostics for research pumps.
Balanced optimal transport for cell-state snapshots, with auditable couplings and synthetic ambiguity benchmarks.
Open syringe-pump math, firmware, and a plunger carriage for in-vitro perfusion. The fluid path stays in the sterile syringe.
Conservative spherical oxygen transport for organoid research, with analytic and nonlinear numerical verification.
Closed-loop planner for in-vitro media factors. Expected improvement versus random search on a synthetic differentiation surface.
Source-traceable organoid mask measurement: object-level morphology, grouped instance agreement, frozen splits and hash-bound receipts. Geometry is not organoid health.
Reproducible atlas mapping public compounds onto aging mechanisms with graded evidence (E0-E4) and Bemis-Murcko scaffold benchmark bake-off.
Control-gene module score for the published SenMayo gene set, with a size-matched random-set bake-off.
Local Docker workbench for computational biology research and agent tools.
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