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  1. BBTools BBTools Public

    Python 6 4

  2. kb_uploadmethods kb_uploadmethods Public

    Python 5 22

  3. kb_gtdbtk kb_gtdbtk Public

    GTDB-Tk App

    Python 4 10

  4. kb_djornl kb_djornl Public

    A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (nodes) and distinct lines of evidence (ed…

    Python 4 5

  5. PangenomeOrthomcl PangenomeOrthomcl Public

    Python 3 7

  6. jgi_mg_assembly jgi_mg_assembly Public

    Contains apps for running the JGI metagenome assembly pipeline

    Python 3 4

Repositories

Showing 10 of 238 repositories
  • kb_kaiju Public
    kbaseapps/kb_kaiju's past year of commit activity
    Python 0 MIT 9 0 2 Updated Oct 8, 2026
  • kb_gtdbtk Public

    GTDB-Tk App

    kbaseapps/kb_gtdbtk's past year of commit activity
    Python 4 MIT 10 7 4 Updated Sep 8, 2026
  • kb_fastqc Public Forked from samseaver/kb_fastqc
    kbaseapps/kb_fastqc's past year of commit activity
    Python 1 MIT 14 0 1 Updated Aug 28, 2026
  • kb_muscle Public
    kbaseapps/kb_muscle's past year of commit activity
    Python 0 MIT 3 0 0 Updated Aug 13, 2026
  • plant_fba Public

    GitHub repository and kb-sdk module for FBA applications involving plants

    kbaseapps/plant_fba's past year of commit activity
    Python 0 MIT 1 0 0 Updated Aug 7, 2026
  • kb_orthofinder Public

    OrthoFinder app for annotating plant enzymes

    kbaseapps/kb_orthofinder's past year of commit activity
    Python 0 MIT 2 0 1 Updated Aug 7, 2026
  • kb_DRAM Public Forked from BortonWrightonLabs/kb_DRAM

    A Kbase app for DRAM

    kbaseapps/kb_DRAM's past year of commit activity
    Python 1 MIT 4 0 0 Updated Aug 6, 2026
  • fba_tools Public Forked from cshenry/fba_tools

    A suite of metabolic modeling tools created using the KBase SDK

    kbaseapps/fba_tools's past year of commit activity
    Perl 1 MIT 20 0 0 Updated Jun 24, 2026
  • kb_Canu Public
    kbaseapps/kb_Canu's past year of commit activity
    Python 0 MIT 1 0 0 Updated Jun 23, 2026
  • kb_Raven Public

    new raven repo

    kbaseapps/kb_Raven's past year of commit activity
    Python 0 MIT 1 0 0 Updated Jun 23, 2026

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