Issues

• Cross_method_entriopy, Cross_method_ARI, Smoothness_entropy python version

  SpatialHackathon/SACCELERATOR#346 · Filter by author Jieran-S opened on Jan 22, 2025
  

• Improve Cross-method-entropy to allow non-equal cluster-number instances

  SpatialHackathon/SACCELERATOR#345 · Filter by author Jieran-S opened on Jan 22, 2025

• Test consensus part of the workflow

  SpatialHackathon/SACCELERATOR#344 · Filter by author Jieran-S opened on Jan 22, 2025

• (Discusssion)Adding a master snakemakem file to run all the workflow in one click

  SpatialHackathon/SACCELERATOR#343 · Filter by author Jieran-S opened on Jan 22, 2025

• (Long term) Increase the reproducibility of the workflow

  SpatialHackathon/SACCELERATOR#342 · Filter by author Jieran-S opened on Jan 22, 2025

• fix deepST

  bug
  SpatialHackathon/SACCELERATOR#340 · Filter by author heylf opened on Jan 20, 2025

• Do we still need the preprocessing steps?

  SpatialHackathon/SACCELERATOR#336 · Filter by author Jieran-S opened on Jan 9, 2025
  2

• README: Scability recommendation and snakemake specification

  SpatialHackathon/SACCELERATOR#335 · Filter by author Jieran-S opened on Jan 6, 2025

• Fix: Trim github branches

  SpatialHackathon/SACCELERATOR#333 · Filter by author Jieran-S opened on Jan 6, 2025
  3

  

• README: Update instruction for customization

  SpatialHackathon/SACCELERATOR#330 · Filter by author Jieran-S opened on Jan 6, 2025
  2

  

• README: A quick example to get started

  SpatialHackathon/SACCELERATOR#329 · Filter by author Jieran-S opened on Jan 6, 2025
  2

  

• Fix: Update the workflow part handling additional installation requirement.

  SpatialHackathon/SACCELERATOR#328 · Filter by author Jieran-S opened on Jan 6, 2025
  

• data_split_abc_atlas_into_two

  SpatialHackathon/SACCELERATOR#318 · Filter by author meghanaturner opened on Jul 11, 2024
  2

  

• Methods: Regular neighboring function to technology adaptability

  SpatialHackathon/SACCELERATOR#300 · Filter by author Jieran-S opened on May 27, 2024

• data_visium_breast_cancer

  dataVisium
  SpatialHackathon/SACCELERATOR#251 · Filter by author kbiharie opened on Mar 21, 2024
  1

  

• Path encoding for cross-method utility functions

  enhancementhelp wanted
  SpatialHackathon/SACCELERATOR#234 · Filter by author Jieran-S opened on Feb 26, 2024

• Matched label returns NaN in metric calculation

  bughelp wantedmetric
  SpatialHackathon/SACCELERATOR#215 · Filter by author Jieran-S opened on Feb 19, 2024
  3

• simulated_data_Giotto

  datametricRsimulation
  SpatialHackathon/SACCELERATOR#145 · Filter by author pfeiferl opened on Dec 14, 2023
  

• data_kidney_KPMP_VISIUM

  dataVisium
  SpatialHackathon/SACCELERATOR#101 · Filter by author FADHLyemen opened on Dec 13, 2023
  6

  

• method_Voyager

  methodpythonR
  SpatialHackathon/SACCELERATOR#93 · Filter by author geogav opened on Dec 12, 2023
  

• performance_vs_read_depth

  datametricsimulation
  SpatialHackathon/SACCELERATOR#89 · Filter by author naveedishaque opened on Dec 10, 2023
  

• scaling_with_image_size

  datametricsimulation
  SpatialHackathon/SACCELERATOR#88 · Filter by author naveedishaque opened on Dec 10, 2023
  

• domain_specific_metric_calculations

  metric
  SpatialHackathon/SACCELERATOR#86 · Filter by author naveedishaque opened on Dec 10, 2023
  2

  

• train_a_regressor

  simulation
  SpatialHackathon/SACCELERATOR#85 · Filter by author naveedishaque opened on Dec 10, 2023
  

• de-optimised_gene_selection

  simulation
  SpatialHackathon/SACCELERATOR#84 · Filter by author naveedishaque opened on Dec 10, 2023