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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S. No PII or PHI permitted

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain.

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

No PII/PHI permitted for hosting in this environment.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 25 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    41 50

Repositories

Showing 10 of 574 repositories
  • hubhelpr Public

    R package providing helper functions for CDC forecast hub maintenance and report generation.

    R 3 Apache-2.0 0 19 5 Updated Oct 7, 2026
  • dibbs-ecr-viewer Public

    DIBBS eCR Viewer

    CDCgov/dibbs-ecr-viewer's past year of commit activity
    HTML 14 CC0-1.0 5 89 3 Updated Oct 7, 2026
  • cfa-dagster Public

    A package to get CFA users running quickly with Dagster on CFA's azure infrastructure.

    CDCgov/cfa-dagster's past year of commit activity
    Python 8 Apache-2.0 1 10 9 Updated Oct 7, 2026
  • cfa-flu-simulator Public

    An interactive simulator ODE model

    CDCgov/cfa-flu-simulator's past year of commit activity
    Rust 1 Apache-2.0 1 41 6 Updated Oct 7, 2026
  • Mira Public

    MIRA: Portable, Interactive Application for High-Quality Influenza, SARS-CoV-2 and RSV Genome Assembly, Annotation, and Curation

    CDCgov/Mira's past year of commit activity
    Python 25 6 1 0 Updated Oct 7, 2026
  • wastewater-informed-covid-forecasting Public

    Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub

    CDCgov/wastewater-informed-covid-forecasting's past year of commit activity
    R 51 Apache-2.0 14 12 3 Updated Oct 7, 2026
  • CDCgov/dibbs-text-to-code's past year of commit activity
    Python 5 Apache-2.0 3 9 7 Updated Oct 7, 2026
  • cfa-cloudops Public
    CDCgov/cfa-cloudops's past year of commit activity
    Python 2 Apache-2.0 1 19 5 Updated Oct 7, 2026
  • cfa-stf-forecasttools Public

    Python tools for short-term forecasting

    CDCgov/cfa-stf-forecasttools's past year of commit activity
    Python 11 Apache-2.0 4 4 4 Updated Oct 7, 2026
  • nchs-pii-detection-presidio Public

    Sample code for using Presidio for PII detection. Based on lab result redaction efforts for the National Ambulatory Medical Care Survey, as presented at 2026 FCSM conference. No real PII present.

    CDCgov/nchs-pii-detection-presidio's past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 1 Updated Oct 7, 2026